Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806671.1_cds_XP_016494472.1_8881
CDS Infomation

[gene=LOC107813695] [db_xref=GeneID:107813695] [protein=squalene synthase-like] [protein_id=XP_016494472.1] [location=complement(join(102872..102934,103025..103070,103140..103231,103627..103715,103982..104057,104612..104758,104928..105032,105119..105262,105782..105851,106135..106210,106305..106394,106782..106824,108007..108201))] [gbkey=CDS]
Sequence

ATGGGGAGTTTAGGTGCAATGCTGAGGAATCCTGAGGATATTTATCCATTGATGAAACTG
AAGTTAGCGGCGCGATATGCAGAGAAACAGATCCCTCCTCAGCCACATTGGGCCTTCTGT
TATATAATGCTTCACAAGGTTTCTCGTAGCTTTTCTCTTGTCATTCAACAGCTTCCCTTG
GAGCTTCGCGACGCTGTATGCATTTTCTATTTGGTTCTTCGAGCACTTGACACTGTCGAG
GACGATACCAGTGTAGCCACGGAGGTGAAAGTACCTATTTTGATGTCATTCCATCGCCAT
GTTTATGATCGTGAATGGCATTTTTCGTGCGGTACAAAGGACTACAAGGTTCTTATGGAC
CAGTTTCATCATGTTTCGACTGCTTTTCTGGAGCTAGAGAAACATTACAAGGAGGCAATT
GAGGACATAACTATGAGGATGGGTGCAGGAATGGCAAAGTTTATATGCAAGGAGGTGGAA
ACAATTGGTGATTATGATGAATATTGTCACTATGTAGCCGGGCTCGTTGGATTAGGCTTA
TCAAAACTTTTCCGCGCCTCTGGGAAAGAAGATTTTGCATCAGATTCTCTCTCCAATTCC
ATGGGTTTATTTCTTCAGAAAACAAATATCATTAGAGATTATCTGGAGGACATAAATGAA
GTACCTAAGTGTCGCATGTTTTGGCCTCGTCAGATTTGGAGTAAATACGTTGACAAGCTC
GAGGACTTGAAGTGTGAGGAAAACTCTGTAAAGGCAGTGCAATGTCTGAATGAAATGGTC
ACTAATGCTTTATCACATGTAGAAGATAGTTTGACTTACATGTCCACACTGCGAGATCCT
GCTATCTTTCGATTCTGTGCTATTCCACAGGTCATGGCAATTGGGACATTAGCAAAGTGC
TACAACAACATTGAAGTTTTCAGAGGAGTTGTAAAAATGAGACGCGGTCTCACTGCTAAG
GTTATTGACCGGACCAGGACCATGGCCGATGTATATGGTGCTTTCTACGACTTCTCTTGT
ATTCTGAAAGCCAAGGTGGAGTATAAAGATCCAAATGCCGCAAAAACTTTAAGAAGGCTT
GAAACAATCTTGAGAACTTGCAAAAACTCTGGAACCTTGAATAAAAGGAAATCTTTCGTA
ATCCAGAGCAGACCTAATTACAATTCAGCTTTGGTTGTTGTCCTTGTTGTCATAATAGCT
ATCCTTATTGCATACCTATCTGGAAACCGGCCTTAG

Peptide Sequence

PEP ID

XP_016494472.1
PEP Infomation

PREDICTED: squalene synthase-like [Nicotiana tabacum]
Sequence

MGSLGAMLRNPEDIYPLMKLKLAARYAEKQIPPQPHWAFCYIMLHKVSRSFSLVIQQLPL
ELRDAVCIFYLVLRALDTVEDDTSVATEVKVPILMSFHRHVYDREWHFSCGTKDYKVLMD
QFHHVSTAFLELEKHYKEAIEDITMRMGAGMAKFICKEVETIGDYDEYCHYVAGLVGLGL
SKLFRASGKEDFASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPRQIWSKYVDKL
EDLKCEENSVKAVQCLNEMVTNALSHVEDSLTYMSTLRDPAIFRFCAIPQVMAIGTLAKC
YNNIEVFRGVVKMRRGLTAKVIDRTRTMADVYGAFYDFSCILKAKVEYKDPNAAKTLRRL
ETILRTCKNSGTLNKRKSFVIQSRPNYNSALVVVLVVIIAILIAYLSGNRP

Transcript Sequence

Gene sequence data has not been registered.